The Basic Input Output System is responsible for setting up your boot sequence, performing the system check, setting up the chipset to the specific cpu and pereferials, etc, etc. The chip you are re-programming is a Flash ROM (Read Only Memory). The way the chip works is like this:
When it is programmed, you can only burn a 1 to a 0. It is therefore necessary to erase the entire chip to all 1's prior to programming......and that is the catch. If you mess up the BIOS flash proceedure, you can render your mother board a paper weight. Since the boot code has been erased as the first step (your system is running out of RAM while this process goes on), failure of the programming step results in mb failure. The code that knows how to flash the chip actually resides in the chip.
This seems sort of funkey, but has been around for some time. My best advice is to leave your mb BIOS alone unless you are experiencing problems. If you do flash your BIOS, be sure to make a backup of your previous version and follow the procedure specified by the manufacturer of the mb verbatim.