Originally posted by: nordloewelabs
not sure if i understood your situation, but since you mentioned Gparted, i'll give it a shot. i had a problem with it a few weeks ago when re-sizing my partitions.
the problem happened because i ran Gparted after a Windows crash. Gparted's error message stated that there were errors in the filesystem that needed to be fixed before i could perform any partition operations.
i rebooted the system, scheduled a CHKDSK, then rebooted again to let CHKDSK do its magic. the checking went on smoothly and the system rebooted automatically afterwards. however, this time, i didnt let Windows load -- i put the Gparted disc back into the drive and booted the LiveCD. the result was that Gparted gave me the very same error message about a filesystem problem. i rebooted once more, let Windows fully load, then restarted the system with the LiveCD. bingo!
so the rule is: after a CHKDSK, you must let the system load completely. and if the load is successful, shutdown the system properly, then load Gparted.