Absolutely, that was what I was thinking, so I redid some things....
I first hooked it up to the controller, but that gives me the conflict. I'm positive it is because the MB has a RAID controller AND a standard IDE controller so I can have up to 8 devices with the MB itself. Since there is already a second "SCSI" seen spare controller onboard it is causing MUCHO problems getting them both to behave together. I go with the fact I'm either going to have to put all my HDs on the supplied controller (NOT acceptable), or assume I can't use the controller at all.
So, with the given that I can't use both controller's I went back and made the 200GB drive a slave to a DVD drive with the onboard IDE controller knowing (hoping) that the 200GB couldn't be labeled a boot device, and even if it could, My bios states look at the RAID controller first for a boot device. As my last post said, it only showed up as 32GB instead of 200GB, but the MB bios AND the maxblast software both still show it correctly as a 200 GB capacity until I get into windows.
I remember reading something about limiting the HD size by way of a jumper so I looked for that in the manual. I thought maybe I could be satisfied using the drive as a 120GB if it limits it there. It turns out, that was the first error I was making. I had actually set the jumper to limit the HD size instead of acting as a slave, and it limits it to the 32GB I was seeing. So yes, there was a problem with the drive, but it was something I did. I blaim this on being hasty, and the manual's pictures being misleading to those being hasty

. This cleared up that, but it still didn't get windows to look at it correctly.
While looking through the manual about the limiting of HD size by way of a jumper, I see that MAXblast makes a change in the registery of Windows SP1 in order for it to see drives over 137GB. HMMMM...It gets interesting when I go back and make sure that maxblast is installed correctly. I guess I installed Maxblast BEFORE I installed Windows SP1 because it hadn't made that update to the registery. That turned out to be the crucial error I was making. After I installed maxblast again, it realized it hadn't made the registery changes it needed to. It did so, and I restarted only to look at NO conflicts.
Could it be installed correctly I wondered. Is this finally the end of the dilema? Turns out it solved all the problems. AND, to top that, it's working exactly like I hoped. I see it as one partition without any need for an extra controller.
For those who may search for this in the future with a similar problem:
1)Install the Windows SP1 and all other updates FIRST
2)Install the MAXblast or your HD's manufacturer's software next.
3)install the drive making sure the first pins are jumped for master or no pins are jumped for slave for the 200GB maxtor.
My only issue now will be the fact I am using this as a backup storage device. I won't be able to get to some information I might need to before I will use the drive to get the rest of my information. I'll have to figure out a way to save that on a CDR.
Thanks for the help boonesmi.