You're right. Why on earth would I dismiss an article from a website that currently has headlines of "Is your neighbor a CIA snitch?" And "Twerking Miley Cyrus pushes homosexual agenda" on it? This is a source deserving of sober reflection and refutation.
Seriously, do you know what infowars.com is? It is the website of this guy:
http://en.m.wikipedia.org/wiki/Alex_Jones
If you have something to say, find a real source. Not batshit crazy conspiracy theory websites.
As for what I think you are trying to say about the NYT article, this seems to be a discussion now about who people consider to be Al-Qaeda. If we use the republican definition of the term then just about every extremist group in the world is Al-Qaeda. That's not helpful.
If there is something else about the report you don't like, mention it specifically and provide rebuttal evidence from a credible source and let's talk about it.