To bring the heatsink into contact with the CPU core on a SocketA CPU, the clip has to exert enough pressure to compress the shock pads at the corners of the CPU.  AMD approval supposedly requires a non-anodized heatsink, although Alpha manages to get around this somehow.  So when the FOP32 was re-designed for AMD approval, it went from black-anodized to silver and also gained the higher-pressure clip.  
The black-anodized finish is not really going to make an appreciable difference, but if the heatsink isn't meeting the core properly you will be in trouble.  I think you are fine with that setup, Noriaki.