By full SSD activity, I mean when I go the the Task Manager's performance monitor to check the disk transfer rate graph at the point when the stuttering occurred, the disk transfer rate was at 100%. I was running the Task Manager's performance monitor while playing the game. I didn't test it out with the games I mentioned in this thread but the task manager showed full disk transfer rate in Prince of Persia: Forgotten Sands when it stuttered while turning another direction and Wolfenstiein: The New Order during the cutscenes if I have Ultra settings. Actually I still had that problem with Wolfenstien installed on my HDD instead of my SSD as well, and the stutters in the cutscenes were not less noticeable on the SSD. With the games I mentioned in my first post, it was the same kind of stutter, and that's why I assumed it was because my disk was being busy. It's not from a lack of RAM obviously since I have 32 GB RAM.
I have a "Games" partition on my SSD because it saves me time after doing a fresh Windows install as I don't have to copy my backed up Steam and Origin games from my USB hard drive to my SSD and my games are ready play, except a few of my Steam games need to have the cache integrity verified or else they won't start but that's faster than copying them back to my SSD and running "Install" for Steam to discover the game files for each game I copied back. I keep games I'm currently playing and most of my games backlog on that partition. I also keep X-Plane 10 on the "Games" partition on my SSD since it does not require reinstallation after reinstalling Windows and doing it this way saves me time if I ever have to reinstall Windows. Have a dedicated "Games" partition and a dedication "OS" partition is not the cause of the stuttering as I also had stutter issues with OS and games on the same partition, in case anyone here is wondering.
Also you can partition an SSD. That's what Windows 8.1 setup does when I want to do a fresh reinstall of Windows 8.1, it makes a 350 MB reserve partition automatically when I tell it to reinstall Windows in the unallocated space.
Would this be more of a video card issue than a disk issue that causes the 1-second stuttering? Like the VRAM in my video card might be defective and so it might be accessing the graphics from disk rather than VRAM at the point of those stutters?