OK..so after seeing Reloaded 3 times, I have come to the conclusion that that only major question that Reloaded has currently left un-answered is :
What the hell is going on with Smith ?
What was he doing in the hallway with Neo, Morpheus, and the KeyMaster at the end ?
What does he mean at the beginning when he talks about things starting all over again, "just like the last time" ?
How does his program last inside 'whats-his-name's body in zion ? (this may be the clearest indicator that Zion is part of the Matrix as well)
What the hell is going on with Smith ?
What was he doing in the hallway with Neo, Morpheus, and the KeyMaster at the end ?
What does he mean at the beginning when he talks about things starting all over again, "just like the last time" ?
How does his program last inside 'whats-his-name's body in zion ? (this may be the clearest indicator that Zion is part of the Matrix as well)