The only way I can see it helping is if you have a motherboard that only supports 1 or 2 X AGP... in that case, increasing the speed would increase the bandwidth, which would be necessary for say a Ti4600 or higher. However... the performance gains are very small if you're running at least 4X AGP. I tested it a while back with my Ti4200... and increasing the AGP bus from 66 to 85 with 4X AGP didn't produce ANY noticeable gains. But when I set the card to 2X AGP, there was about an average of a 3-5% performance increase. So... with 8X AGP, I wouldn't expect any gains by overclocking the AGP bus... mostly all it does is reduce stability.
The increases in speed I would probably attribute to the reduced latency of the higher clock speed, rather than the increased bandwidth.
As far as the PCI bus... hard drives are VERY sensative to the PCI clock frequency. Normally it's 33 Mhz... when it gets up around 38 or 40, you can expect to see some random data corruption, BSOD's, and lockups... up around 45, you'll be lucky to boot into Windows, and other devices like sound cards and NIC's and modems will start to have problems. Yes, there are some people who don't have a PCI lock on their motherboard, and are able to run the PCI bus around 40-45 Mhz with stability issues, but that's a rare occasion. There are exceptions to every rule, but I wouldn't count on being that 1% of people who don't have stability issues above 40 mhz =)