The only way that you are going to have an adverse affect from negative pressure (more CFM out than in) is if the rest of your case is sealed tight as a drum. The 6890 has vent holes in several places that will let air into the case to equalize the pressure so in a way you are getting airflow for free. While I agree that equal input/output is good, I actually think that having more output than input is better. There are limits to this however, I wouldn't suggest having any more than a 30 CFM difference. On the other had I would not suggest positive pressure as it tends to create heat pockets.
Eric
BTW: You're engineering draft link points to a picture of the 7890.