Just get a Loctite Rear Window Defogger Grid Repair kit, use the conductive paint to close your L1's. It is a one shot deal, and you won't have to worry about it any more. I have done many Durons and T-Birds this way, and it is much more effective than a pencil.
Just search around the forums, and you will see that the KT7A BIOS handles the lowered multiplier/high FSB settings very well, and does not have the boot up problems that some of the mobos like the EPOX and others are having. You just have a bad pencil job going on. I fooled around with penciling at first, and while some people have had luck with it lasting, I never did, and was always wondering when the next time that I would have to re-do it would be.
If you want to take a diamond tipped scribe, and start cutting bridges, be my guest, but I can almost guarantee that using the Loctite conductive paint will fix your problem on the KT7A.