So now you have made it clear that you HAVE tested the rad fans ONE at a time, and any one of them is sufficient to generate the noise.
Back to my suggestion of installing noise isolation rubber between the rad and the case top. I understand fully your worry about damaging other components if the rad assembly drops, and I agree. That is why I suggested turning the whole case on its side, wide right-hand side down. Then you can open the left-hand panel which is now facing up. NOTE that, according to the system manual, the screws fastening each fan to the rad do NOT go all the way through the rad AND the case top, so they do NOT fasten the rad assembly to the inside of the top.That attachment is done by separate screws that are inserted from outside the top, through the top panel and into holes in the rad. It is these screws that need to be removed and replaced when installing vibration dampeners.
I suggested earlier flat thin rubber washers between the rad and inside of the top panel. However, the post above from StefanR5R raises a valid point when he spoke of the solid bolts fastening each fan to the rad. In a similar manner, the existing screws through the top panel into the rad frame will also be a path for transmission of vibrations to the top panel. Flat washers would reduce that, but there is an even better way, rubber grommets. Something like these.
As you can see, a grommet is a sleeve that goes right through the hole in the panel and has flat larger "disks" on both sides of the hole. That way the screw shaft through the hole never actually touches the metal panel. That particular one has a thin "flat" on one side of only 2 mm thickness, so that side would go towards the rad. I am NOT recommending those ones in particular. You should be able to find something similar in a good size by searching in hardware stores.
There IS a problem with this idea. You would have to drill each existing hole in your top panel to a larger diameter to suit the diameter of the grommet's middle "sleeve" part, and that creates metal filings that would need to be cleaned out of your case thoroughly before final installation. And POSSIBLY the existing screws might not be long enough to reach through the full thickness of the grommet. So unless you are comfortable with this plan, the flat rubber washer concept is less complex for installation.
Either way, my main point was turning the case on its side to do the work. When you do that, you can remove the screws from outside the top to detach the rad/fan assembly from inside that top panel. As you do that, the rad can be allowed to drop down against the case's back panel (now on the bottom) and you can carefully prop it in place so it does not rotate over onto your mobo. Position the rad slightly away from the top and insert the screws back through the top panel from the ouside so they stick in. Use tweeezers or something to reach into the space and place a rubber washer onto each screw end. Then gently move the rad into contact with the screw ends and, one by one, turn each screw part way into its matching hole in the rad. When they all are started properly, go around and tighten all. Now you can return the case to its normal upright position.
Of course, IF you opt for the grommets idea, inserting them is a lttle diffeent, but still you can control where the rad assembly is carefully without risking that it fall on something.