Just off the top of my head, and I'm not an auto wiring whiz -- so there's my disclaimer.
Before doing anything specific to the lights, please disconnect the negative terminal of your battery.  Go fix yourself a sandwich and have lunch.  Then reconnect the battery.
More specifically -- review all the procedures for resetting the onboard ECM/ECU engine control computer.  Then -- follow through.  Before anything, disconnecting the battery is likely to be an essential step.
Again -- I'm just making a guess.  I've never owned a model and make as recent as the OP's.  My car has a computer from the mid-90s, and there are advantages that it doesn't do things that  more recent vehicles have done for at least a few years.  
For instance, the voltage and/or amperage of my lights are not polled by the computer through a sensor to determine whether they've burned out or shorted out -- something that is likely reported on the dashboard idiot lights of newer cars.  So I can integrate about 80% of my vehicle's lighting array with the latest LED replacement "bulbs" more easily than would be the case for a car model using halogens and incandescent as new as the last decade.
If the car is manufactured specifically with LED OEM specs, that is another different ballgame.  
Back to the OP -- do you have the shop manual?  Can you find the wiring diagrams for the light-sets specific to the symptoms?  Have you made an inventory of malfunctions?