A CPU PWM 4-pin plug purposely has an offset tab which fits a 3-pin, "non-PWM" fan.
Frankly, with my 680i Striker board, I get better fan-control for the CPU cooling and other fans off Option Fans 1, 2, and 3 plugs. They work with tape-on sensors - - I use that translucent Sensui/Sek-i-sensu whatever thermal adhesive tape to put a sensor on the center heatpipe right at the heatsink base. Trial and error tells me at which temperature to set the threshold in BIOS, and it is very reliable.
If you're going to use a conventional fan plugged into the CPU_FAN port, you can't manually set a threshold -- at least on my own motherboard, and you're limited to low amperage fans -- typically in the amperage range of the stock Intel PWM fan, or around 0.30 amps. Otherwise -- and I do this, too -- I can use a higher-amperage fan off the CPU_FAN port, but I have to manually set the duty-cycle (between 50% and 100%), and disable the motherboard thermal control.
The way I do it, the option fan ports are good for fans with amperages up to and above 1.0A. I typically use fans in the 0.50A to 0.80A range. If I can thermally control them, and assure that the lowest (low-temperature) setting will at least cause the fan to spin up, then I can have low noise for the most part and only moderate noise when the CPU or other components are under load.
But I've tried running a 0.60A fan off my motheboard's CPU_FAN port, and the fins are constantly "wobbling" but never succeed in spinning up.
Your motherboard may be different. But perhaps this provides some insight.