Unless your system is really strange, your ATX power supply should be blowing air OUT (that's the ATX spec at least). If you blow air into the lower back, and out the upper back, you "short circuit" the front of the case. That may or may not be a bad idea, depending on your hard drives.
You don't HAVE to have air blown into the front however. Many cases that blow air into the bottom front and out the top back mean that the air has a long way to go to get to the primary cooling spots (CPU and vidcard). If you have a lot of cables and junk, and a constricted case, that air might be pretty warm before it gets there.
My rig, for example of another way to do things, has a 120mm intake in the back, and ducted to blow over the CPU. Air flows out through 1) an 80mm fan mounted at the top of the case (heat rises, so I think everyone should have a fan at the very top

2) my Enermax PS, which has two fans (one intake on CPU side, and one out at the normal PS out spot), and 3) a (very quiet) blower designed for servers mounted right next to the vidcard, blowing out the adjacent slot. The front of the case doesn't get direct airflow, but the overall case is cool enough for the harddrives. Even that link about said a front cooling fan is "not essential".
All in all, not very noisy. I have the 120mm fan controlled by a rheostat that I turn on when I play games, otherwise, it doesn't need to be on, the back airvents provide enough cool intake.