An EEPRROM is Electrically Erasable. I'm a few years out of date, but the erase/write voltage for a +5v chip was +12V. You set up the address lines, set the data, and strobe +12v to a certain pin.
An EPROM uses an UV light source to erase the data and the programming is as above for an EEPROM.
There are progammers that tie to PCs. You load/develope the program on the PC and then download it to the burner to program the ROM.
Never worked with flash but I assume the process is similar.
The data will need to be in the machine code for the processor you are using. I would need a better idea of what you are attempting say any more.